Please use this identifier to cite or link to this item: https://idr.l4.nitk.ac.in/jspui/handle/123456789/9885
Full metadata record
DC FieldValueLanguage
dc.contributor.authorKumar, P.
dc.contributor.authorBankapur, S.
dc.contributor.authorPatil, N.
dc.date.accessioned2020-03-31T06:51:39Z-
dc.date.available2020-03-31T06:51:39Z-
dc.date.issued2020
dc.identifier.citationApplied Soft Computing Journal, 2020, Vol.86, , pp.-en_US
dc.identifier.uri10.1016/j.asoc.2019.105926
dc.identifier.urihttp://idr.nitk.ac.in/jspui/handle/123456789/9885-
dc.description.abstractAccurate protein secondary structure prediction (PSSP) is essential to identify structural classes, protein folds, and its tertiary structure. To identify the secondary structure, experimental methods exhibit higher precision with the trade-off of high cost and time. In this study, we propose an effective prediction model which consists of hybrid features of 42-dimensions with the combination of convolutional neural network (CNN) and bidirectional recurrent neural network (BRNN). The proposed model is accessed on four benchmark datasets such as CB6133, CB513, CASP10, and CAP11 using Q3, Q8, and segment overlap (Sov) metrics. The proposed model reported Q3 accuracy of 85.4%, 85.4%, 83.7%, 81.5%, and Q8 accuracy 75.8%, 73.5%, 72.2%, and 70% on CB6133, CB513, CASP10, and CAP11 datasets respectively. The results of the proposed model are improved by a minimum factor of 2.5% and 2.1% in Q3 and Q8 accuracy respectively, as compared to the popular existing models on CB513 dataset. Further, the quality of the Q3 results is validated by structural class prediction and compared with PSI-PRED. The experiment showed that the quality of the Q3 results of the proposed model is higher than that of PSI-PRED. 2019 Elsevier B.V.en_US
dc.titleAn enhanced protein secondary structure prediction using deep learning framework on hybrid profile based featuresen_US
dc.typeArticleen_US
Appears in Collections:1. Journal Articles

Files in This Item:
There are no files associated with this item.


Items in DSpace are protected by copyright, with all rights reserved, unless otherwise indicated.